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KDE Scientific

Score 84%



Link:  Link
Depends on  KDE 3.x
Downloads:  5161
Submitted:  Jun 18 2006
Updated:  Nov 3 2009


KBib is a bibliography manager for KDE. It uses BibTex as its native file format

* Add/edit/remove references
* Support copy/paste/drag-drop of references (BibTex entries can be copied/pasted or dragged/dropped from another Kbib window or a text editor into KBib and vice versus)
* Search and download references from Z39.50 servers, SRU servers, Pubmed server, IEEEXplore, ISI Web of Knowledge, Google Scholar, Citebase.org, ArXiv, Spires, Scitation, Optics InfoBase, Science Direct and MathSciNet.
* Download references from remote reference database (opened with Konqueror, Firefox), such as IEEEXplore, ScienceDirect (RIS format), Web of Science (ISI format), Google Scholar (RIS and Endnote formats) into KBib (see screenshot)
* Create new references from plain text, reference identifiers (DOI, ArXiv ID or Pubmed ID) and PDF files.
* Find/remove duplicated references
* Generate citation key automatically
* Check/correct duplicated citation keys
* Lock/unlock citation keys (to prevent unwanted change of citation keys)
* Sort references
* Search references(fairly simple)
* Cite selected references into Lyx/Kile (using Lyx pipe)
* Support string macros
* Import references from Bibtex/RIS/ISI/Endnote/COPAC/MODS XML/PubMed XML/Endnote exported Bibtex (without citation key) files
* Export to RIS/Endnote/MODS XML/HTML files
* Save selected references into a new file
* Support user defined reference types
* Add/Delete/Edit reference types
* Allow different view modes (view all/by reference type/selected references/unselected references)
* Group references by various properties. References can be grouped by reference type and any field (user defined). Group view can be disabled.
* Allow flexible displayed fields
* Generate bibliography from selected references


Version 0.6.6:
- New remote database searchers: OpticsInfoBase, ScienceDirect and MathSciNet
- Fixed Google Scholar and IEEEXplore searchers
- Updated DOI download to work with new authentication method in Crossref
- Minor UI tweaks

Version 0.6.5:
- New remote database searchers: ArXiv, Spires and Scitation
- Improved Google Scholar searcher
- Fixed problem with download reference from Crossref

Version 0.6.4:
- New remote database searchers: Google Scholar and Citebase.org
- Improved remote database search dialog: new tab to enter query string direcly, remember last search options
- New reference filter
- Fixed problem with locking citation keys
- Fixed problem with authentication when searching Z39.50 databases which require authentication

Version 0.6.3:
- Fix crashing when performing searching with white space (thanks Michael Martins for the fix)
- Fix lost of comment field beginning with white space after saving file
- Fix new reference from DOI. Crossref.org user name and password can be entered to allow crossref.org access
- Fix missing publisher field for book in default reference type definition table
- Add German translation (by Benjamin von Engelhardt)
- Make poppler optional. Without popper and poppler-qt, new reference from PDF files will be disable.

Version 0.6.2:
Usability improvements:
- Configuration dialog: add options to change the order of datasource
- Remote search dialog: double click to import an entry, press enter to start searching
- Reference editing dialog: ask to save data if close dialog with modified data
- New reference from text dialog: add option to add selected text to multiple value fields (e.g. authors, keywords)

New option to cite selected references directly to Kile (version 2.0 or later) via DCOP

Turkish translation (by Serdar Soytetir)

Version 0.6.1:
New features:
- New references from identifiers: DOI (limitation: only the last name of the first author is available), ArXiV ID and PubMed ID
- New references from PDF files containing DOI or ArXiV codes
Bug fixes:
- Not updating groupview after adding new entries when starting KBib with a new document
- Not updating preview when an entry is selected by keyboard navigation
- Not active window after importing references
- Mouse on waiting state when opening RIS, ISI or Endnote files
- Sorting in groupview
- Some issues with converting to Latex code when importing references
- Crashing when opening some non-bibtex files
- Not active year search field in IEEEXplore searcher
- Compilation problem with yaz >= 3.0.0

Version 0.6:
- Added ISI Web of Knowkedge search, databases supported: Web of Sciences and Current Content Connect
- Updated reference editing dialog, use different editing widgets for different field types
- Added reference field customisation
- Updated reference type customisation
- Added batch set field content operation
- Added replace string operation
- Added copy field content operation
- Improved reference downloading operation, a new session only starts when no session is running
- Added converting string macros into full string when displaying
- Changed Insert File command to Import File and moved to File menu

Version 0.5.4:
- Improved remote database search dialog.
- Added IEEEXplore search.
- Added global string macro table. String macros can be saved into a global list and imported in all new KBib sessions.
- Fixed the problem of occasional lost of string macros after saving file.

Version 0.5.3:
- Added remote database searching. Z39.50, SRU and Pubmed databases can be searched.
- Added dialog to create new reference from plain text.
- Improved ISI importer.
- Fixed crashing when opening some non-BibTex file directly. - Fixed some minor bugs.

Version 0.5.2:
- Added UTF8 encoding supprt. KBib now can open, display and save BibTex file with UTF8 encoding characters correctly.
- Fixed missing keywords when importing references from certain websites.

Version 0.5.1:
- Added preamble support.
- Added exporting to MODS, HTML and importing from Pubmed (XML), MODS, COPAC files (import/export filters are now based on bibutils 3.27)
- Added auto text completion for authors, editors, journal and keywords fields in reference editing dialog
- Added note editing in reference editor, long, multiline notes, comments or reviews can be added to references
- Added link to local file and DOI functions
- Added option in configuration dialog to control how to compare two references
- Added option to control how the authors to be displayed in the main view
- Added option to set the keyword seperator
- Added menu entry to copy selected references as formated string
- Fixed crashing when opening files saved by Jabref

Version 0.5:
- Added groupview
- Added field delimiter option in configuration dialog. Different delimiter can be used when writing BibTex file.
- Fixed missing year when importing ISI file or downloading references from ISI Web of Knowledge.
- Fixed problem of opening URL with space or &
- Internal code refactoring and minor bug fixes

Version 0.4.2:
- Fixed problem of opening files with undefined reference type.
- Fixed reference editing dialog. Newly entered data is not lost when changing reference type.
- Fixed problem of crashing when create citation key with empty author.
- Undefined fields now read in as extra fields.

Version 0.4.1:
- Fixed mime type definitions so that references from remote reference database can be downloaded into KBib.
- Fixed missing files and directories.

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 problem compiling

 by ijon45 on: Aug 11 2006
Score 50%

Application does not compile with gcc 4.1.0 due to a char* to unsigned int casting.

I have to change lines 195 and 197 in the newstr.cpp file by

if ( startat > endat ) return;

seglength= endat - startat;

and then application compiles without problem

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 Re: problem compilin

 by beam on: Aug 18 2006
Score 50%

Thank you for reporting the problem. It has been fixed in V0.5.2. I'm also using gcc 4.1.0 (FC5) but it does not pick up the problem.

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 Re: Re: problem comp

 by ijon45 on: Aug 18 2006
Score 50%

In fact I used gcc 4.1.0 on a Suse 10.1 x86_64 machine

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 crash on open exist'

 by ikkinu on: Aug 30 2006
Score 50%

While opening existing file here's the backtrace after kbib crashed. Maybe it could be helpful.

username@ubuntu:~$ cat kbibcrash
Using host libthread_db library "/lib/tls/i686/cmov/libthread_db.so.1".
[Thread debugging using libthread_db enabled]
[New Thread -1208633664 (LWP 14598)]
[KCrash handler]
#6 0x0809bcd7 in BibentryTable::readBibfile ()
#7 0x080a572c in KBibDoc::openDocument ()
#8 0x080aaf9a in KBibApp::openDocument ()
#9 0x080ad842 in KBibApp::startKbib ()
#10 0x080ada70 in KBibApp::startup ()
#11 0x080b7d83 in main ()

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 by logotux on: Aug 31 2006
Score 50%

I converted the .rpm package to .deb with alien on Kubuntu 6.0.6 and installed it with kpackage. There were no problems, everything running smoothly. It's a good tool. Many thanks to T. N.

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 Few comments/?s

 by llama46 on: Sep 5 2006
Score 50%

Great Great software. Trying to switch to Linux, was worried about switching from Endnotes- but that program is a piece of *(tin), after a few minutes I already like yours better.

A few things:
1) I installed on Kubuntu (Dapper)- ran alien on the rpm and installed via dpkg -i fine (I think I had the qt libs installed).

However, I can't seem to find the help (maybe KDE environment switch or some such not set). Anyhow, I've searched the machine and can' t seem to find it. Is it available for download elsewhere? (only things I see are in /usr/share/doc/kbib ... only copyright and changelog, also see no html in the package

2) Primary reason I wanted the above: I primarily use ISI database. Your import seems to work great, I just wanted to see how to modify a few of the fields (an see what you meant by "As string macro")... I wanted to add a few more of the fields such as alternate journal name, and one or two others... most importantly, I wanted to translate the URL to the ISI database (most useful feature in Endnotes IMO). If I am able to get this I'd be glad to pass it along...

Thanks for your great work. (also works seamlessly with Kile, do most people prefer lyx? It still seems a bit foreign after winedit...)

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 Re: Few comments/?s

 by beam on: Sep 5 2006
Score 50%

At the moment, there is no help file. Only type of documentation available is the FAQ at http://user.digisurf.com.au/~thachly/kbib/FAQ.html
You can add more fields to a reference entry in the extra field tab (click Add button to add extra field, then edit field name and field value). You also can add more fields to a reference type permenantly, please look at FAQ for how to do it.
By default, all reference types has URL field. Is it not what you want?

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 Re: Re: Few comments/?s

 by llama46 on: Sep 6 2006
Score 50%

Thanks, I hadn't seen your FAQ page before. I'll try modifying the FF .mailcap for direct import.

(What I had imported thus far I saved as field tagged plain text... and the URL field is just a number, e.g.:
UL 000237431600055 ... not very useful for opening in a browser!)

Thanks again.

Reply to this


 Re: Re: Re: Few comm

 by beam on: Sep 6 2006
Score 50%

OK, I know what you mean now. Bibutils is used in KBib as ISI import filter. Currently, the UT field in ISI file is discarded by Bibutils when converting from ISI to bibtex. After looking at Endnote and bibutils code, I found out the way to turn UT field into ISI URL link. I will add this feature into next release of KBib.

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 Re: Re: Re: Re: Few comm

 by llama46 on: Sep 6 2006
Score 50%

Nice work... you figured out the whole (Goto:ISI) part of their script? I was nosing around a bit, and was going to look into it later- but your script-fu is obviously much more powerful than mine!

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 Re: Re: Re: Re: Re:

 by beam on: Sep 7 2006
Score 50%

You can mannualy convert the accession number into real URL by setting the URL field to: http://links.isiglobalnet2.com/gateway/Gateway.cgi?GWVersion=1&SrcAuth=KBib&SrcApp=KBib&KeyUT=xxxxxxxxxxxxx
where xxxxxxxxxxxxx is the ISI accession number.
It should be done automatically when importing ISI file in the next release of KBib.

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 Re: Re: Re: Re: Re: Re:

 by llama46 on: Sep 7 2006
Score 50%

Works perfectly! Thanks. Again, very very nice work.



 Gentoo Ebuild

 by rasmussen74 on: Sep 10 2006
Score 50%

Nice application. For those using Gentoo Linux, I've added an ebuild in bug #147057 on bugs.gentoo.org.

Link: http://bugs.gentoo.org/show_bug.cgi?id=147057

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 Re: Gentoo Ebuild

 by iseppo on: Oct 28 2006
Score 50%

very nice, do you have any experiences with overlays? I think the right place for this ebuild would be in gentoo-science overlay, an email to their list (gentoo-science@lists.gentoo.org) might be sufficient.

Reply to this


 conflict w/ kdelibs

 by saqer on: Sep 11 2006
Score 50%

The file

conflicts with the file x-bibtex.desktop from kdelibs. Ofcourse if you are installing from source, the file from kdelibs will be replaced. My suggestion is to remove the creation of this file by the package since pretty much every linux installation with kde will have the kdelibs installted as well.

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